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Kenya to Introduce New Malaria Treatment to Curb Growing Drug Resistance

The introduction of the new malaria drug, ASPY, follows research that found changes in malaria parasites linked to drug resistance, raising concerns that artemether-lumefantrine, the treatment Kenyan hospitals have relied on since 2006, may not work as well as it once did

Updated on 5 min readAfricaKenya
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Kenya is set to receive the first batch of a new malaria drug in November, with four counties expected to start using it in January.

The move follows research that found changes in malaria parasites that may help them survive treatment for longer, raising concerns about the drugs Kenya has relied on since 2006.

The new drug is called artesunate-pyronaridine, or ASPY for short.

It will be used alongside artemether-lumefantrine, or AL, the medicine Kenyan hospitals give to malaria patients.

"The Ministry of Health is introducing a new molecule ASPY that will be used across the country," said Dr Regina Kandie, Head of Diagnostics and Case Management at the National Malaria Control Programme, the Ministry of Health team that runs Kenya's fight against malaria.

ASPY, the new malaria drug, and how it differs from AL

Both drugs combine two medicines.

One works fast to cut the number of parasites in the blood, and the other works more slowly to clear the rest.

AL combines artemether with lumefantrine, while ASPY combines artesunate with pyronaridine.

ASPY has been tried in Kenya before.

A study of 197 children in Mbita, western Kenya, published in 2018, found it was well tolerated and worked at least as well as AL.

Why is Kenya introducing a new malaria treatment?

The change follows a study published on 5 October 2026 by researchers from the Kenya Medical Research Institute (KEMRI) and the Walter Reed Army Institute of Research Africa.

They tested 675 samples of malaria parasites taken from sick people between 2018 and 2024.

The samples came from eight hospitals in seven counties, covering four of Kenya's five malaria zones.

The researchers looked for small changes in the parasite's genes, the instructions that tell the parasite how to live and grow.

Some of these changes are known to help the parasite survive longer after treatment.

The World Health Organization (WHO) keeps a list of them.

Four changes from that list showed up in 25 of the 675 samples, about 4 in every 100. The most common, called A675V, was found in 20 samples.

The researchers reported that it became about five times more common between January 2023 and June 2024, rising from 0.6 per cent to 3 per cent of samples.

The other three changes appeared in only five samples between them.

What the researchers found in Baringo County

Baringo, a semi-arid county, had the most.

Of 71 samples tested there, 12 carried the A675V change, about 17 in every 100.

The WHO says that anything above 5 in every 100 places an area in its category of suspected partial resistance.

The researchers said this was the first such evidence in Baringo.

They noted that people in Baringo catch malaria less often each year than people in Kisumu and Busia.

A warning sign for malaria treatment, not a failed drug

The study mainly looked at the parasite's genes.

By the researchers' own account, it was not designed to show whether AL is failing in patients, or how quickly the parasites cleared after treatment.

The WHO explains that partial resistance means the parasites take longer to clear from the blood. When the second medicine in the mix still works, treatment rarely fails.

The WHO also says full resistance to artemisinin has not been reported.

Dr Edwin Onyango of the National Malaria Control Programme said in April that artemisinin-based treatments remain effective in Kenya, Citizen Digital reported.

Officials named the same four counties for the rollout in that April briefing.

Health workers still see signs of trouble.

"Drug resistance usually gives us a challenge with the patients during treatment.

You get a patient, you initiate treatment but you find the patient is not improving within the prescribed timelines," said Fred Imeda, a clinical malaria mentor in Busia County.

How Kenya's new malaria treatment plan will work

Until now, Kenya has depended mainly on one malaria drug.

Under the new plan, the Nation reported, different approved malaria medicines will be used in different health facilities and counties.

They will be rotated every two years, so the country no longer relies on one drug alone.

Dr Kandie told the Nation the aim is "to confuse the parasite" so that patients get better once their malaria is confirmed by a test.

Kenya has tried this idea before.

The Ministry of Health tested it in Homa Bay County from June 2020, for about two years, using four different malaria drugs in turn, including ASPY on Mfangano and Rusinga islands.

The first four counties are Baringo, Kakamega, Siaya and Busia, from January 2027, and the rest of the country will follow.

Baringo's health officers have been trained to teach other health workers in the county's hospitals and clinics.

Community health promoters, who work with families in their villages, will also help in counties where malaria is common.

"Baringo is one of the counties rolling out the multiple first-line therapies and this will help in ensuring we preserve the anti-malaria drugs that we have," said Dr Patrick Boruett, Director of Preventive Health in Baringo.

Pregnant women and the smallest children will stay on AL

AL is not going away.

Dr Kandie said it will stay "for pregnant women and children under 5 kilogrammes".

"We are still not certain about the side effects of ASPY on pregnant mothers and children and there are patients who have hypersensitivity reactions to ASPY so these cases will maintain treatment using AL," she said.

Malaria drug resistance in Africa: where it has been found

The WHO has confirmed that malaria parasites are becoming partly resistant to artemisinin in Eritrea, Rwanda, Uganda and Tanzania.

It suspects the same in Ethiopia, Namibia, Sudan and Zambia.

Malaria is still a huge problem.

The WHO’s World Malaria Report 2025 estimated 282 million malaria cases and 610,000 deaths worldwide in 2024.

Africa carries by far the heaviest burden, with the WHO African Region accounting for an estimated 94 per cent of cases and 95 per cent of deaths worldwide that year.

Dr Ndinda Kusu, a senior malaria advisor at Jhpiego, a health organisation that supports the programme, said stopping resistance early is better than waiting for it to spread.

"We do not have many options in terms of treatment, and when the options are there, they are very costly.

We have to prevent anti-malarial drug resistance," she said.

Dr Kandie said moving away from AL after 20 years needs everyone involved to work together.

Kenya's first four counties are expected to start using ASPY in January.

The rollout will give an early chance to see how the change works in practice, track how patients respond and watch for signs of resistance.

Portrait of Joseph Mmwa, health journalistJoseph MmwaHealth & Medical Journalist

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